You are working for a pharmaceutical company are are tasked with creating E. Coli that express an influenza antigen (a protein that is recognized by our immune system) for treatment of the influenza virus. The cDNA of the antigen is available in a carrier vector (pCARRY) that contains a kanamycin resistance gene as shown on the left below. In order to get E. Coli to express the antigen, you need to clone the gene for the influenza antigen into an expression vector that contains an E. Coli-specific promoter. You obtain such an expression vector, which contains an ampicillin resistance gene as shown on the right below (pBACTERIA)  a. An end generated by digestion with BamH1 can be ligated to an end generated by digestion with BlgII. Why is this possible? b. To clone the gene for the influenza antigen from pCARRY into pBACTERIA plasmid: i. What restriction enzyme should you use to digest pCARRY? ii. What restriction enzyme should you use to digest pBACTERIA? c. After you ligate the products of your restriction enzyme digests in part b together, and transform E. Coli with the vector obtained, what antibiotic(s) should you culture your E.Coli in to select for the transformed bacterial cells? (circle one) Amplicillin     Kanamycin     ampicillin and kanamycin

Biochemistry
9th Edition
ISBN:9781319114671
Author:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.
Publisher:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.
Chapter1: Biochemistry: An Evolving Science
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You are working for a pharmaceutical company are are tasked with creating E. Coli that express an influenza antigen (a protein that is recognized by our immune system) for
treatment of the influenza virus. The cDNA of the antigen is available in a carrier vector
(pCARRY) that contains a kanamycin resistance gene as shown on the left below. In
order to get E. Coli to express the antigen, you need to clone the gene for the influenza
antigen into an expression vector that contains an E. Coli-specific promoter. You obtain such an expression vector, which contains an ampicillin resistance gene as shown on the right below (pBACTERIA) 

a. An end generated by digestion with BamH1 can be ligated to an end generated by digestion with BlgII. Why is this possible?

b. To clone the gene for the influenza antigen from pCARRY into pBACTERIA plasmid:
i. What restriction enzyme should you use to digest pCARRY?
ii. What restriction enzyme should you use to digest pBACTERIA?
c. After you ligate the products of your restriction enzyme digests in part b together, and transform E. Coli with the vector obtained, what antibiotic(s) should you culture your E.Coli in to select for the transformed bacterial cells? (circle one)
Amplicillin     Kanamycin     ampicillin and kanamycin

E.Coli-specific
BamHI
start
promoter
codon
200
Bglll
EcoRI
influenza
BamHI
antigen
200
ORI
300
EcoRI
stop
codon
РВАСTERIA
7000bp
100
PCARRY
3000bp
Bgll
ORI
kanR
ampR
BgllI:
BamHI:
ЕcoRI
5'...AGATCT...3'
5'...GGATCC...3'
5'...GAATTC...3'
3'...TCTAGA...5’
3'...CCTAGG...5'
3'...CTTAĄG...5’
Transcribed Image Text:E.Coli-specific BamHI start promoter codon 200 Bglll EcoRI influenza BamHI antigen 200 ORI 300 EcoRI stop codon РВАСTERIA 7000bp 100 PCARRY 3000bp Bgll ORI kanR ampR BgllI: BamHI: ЕcoRI 5'...AGATCT...3' 5'...GGATCC...3' 5'...GAATTC...3' 3'...TCTAGA...5’ 3'...CCTAGG...5' 3'...CTTAĄG...5’
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