A study published in the journal PLoS One (https://doi.org/10.1371/journal.pone.0217796 ) in 2019 presented results of a GWAS searching for loci impacting the risk of prolonged QRS in Hispanic/Latino people living in the U.S. QRS prolongation has been associated heart failure and cardiovascular mortality. The Manhattan plot below summarizes the results. The significance threshold for this study is shown as a horizontal line at -log₁0(p-value) ~7.5. The names of candidate genes at each associated locus are shown at the top of the corresponding SNP tower. How many loci containing at least one gene affecting prolonged QRS risk were identified?

Concepts of Biology
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Author:Samantha Fowler, Rebecca Roush, James Wise
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Problem 13CTQ: Identify a possible advantage and a possible disadvantage of a genetic test that would identify...
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A study published in the journal PLoS One
(https://doi.org/10.1371/journal.pone.0217796 ) in 2019 presented results of
a GWAS searching for loci impacting the risk of prolonged QRS in
Hispanic/Latino people living in the U.S. QRS prolongation has been associated
heart failure and cardiovascular mortality. The Manhattan plot below
summarizes the results. The significance threshold for this study is shown as a
horizontal line at -log₁0(p-value) ~7.5. The names of candidate genes at each
associated locus are shown at the top of the corresponding SNP tower. How
many loci containing at least one gene affecting prolonged QRS risk were
identified?
-log10(p)
C
10-
2
0
SCN5A-SCN10A
2
3
CDKN1A
HAND1
6
7
8
VTI1A
201
9
10
11
SYT1
MYOCD
:
...
12 13 14 15 16 17 18 19 20 2122 XY
Transcribed Image Text:A study published in the journal PLoS One (https://doi.org/10.1371/journal.pone.0217796 ) in 2019 presented results of a GWAS searching for loci impacting the risk of prolonged QRS in Hispanic/Latino people living in the U.S. QRS prolongation has been associated heart failure and cardiovascular mortality. The Manhattan plot below summarizes the results. The significance threshold for this study is shown as a horizontal line at -log₁0(p-value) ~7.5. The names of candidate genes at each associated locus are shown at the top of the corresponding SNP tower. How many loci containing at least one gene affecting prolonged QRS risk were identified? -log10(p) C 10- 2 0 SCN5A-SCN10A 2 3 CDKN1A HAND1 6 7 8 VTI1A 201 9 10 11 SYT1 MYOCD : ... 12 13 14 15 16 17 18 19 20 2122 XY
Two of the loci identified in the 2019 study were not identified in prior GWAS
studies focused on this trait in people of European or African ancestry, and
those studies identified some loci not identified in this 2019 study of
Hispanic/Latino people. Which of the following statements is the most likely
explanation for these discrepancies?
Some of the genes impacting prolonged QRS risk are different in people of different
ancestry groups
People of Hispanic/Latino ancestry have a higher overall risk of prolonged QRS
The methodology employed in this study was flawed
People of Hispanic/Latino ancestry have a lower overall risk of prolonged QRS
Transcribed Image Text:Two of the loci identified in the 2019 study were not identified in prior GWAS studies focused on this trait in people of European or African ancestry, and those studies identified some loci not identified in this 2019 study of Hispanic/Latino people. Which of the following statements is the most likely explanation for these discrepancies? Some of the genes impacting prolonged QRS risk are different in people of different ancestry groups People of Hispanic/Latino ancestry have a higher overall risk of prolonged QRS The methodology employed in this study was flawed People of Hispanic/Latino ancestry have a lower overall risk of prolonged QRS
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